Scholarly Output

Selected Publications & Presentations

491 citations · h-index 8 · i10-index 7 (Google Scholar, October 2026)

2026

CatRange enables robust prediction of enzyme variant kinetic regimes.

Karuna Anna Sajeevan and Abraham Osinuga et al. · First-author: Abraham Osinuga. PNAS Nexus: pgag309.

Karuna Anna Sajeevan and Abraham Osinuga share first authorship.

"Mutation-sensitive predictions of enzyme kinetic regimes built around protein sequence, substrate chemistry, and curated evidence."

Enzyme Engineering Machine Learning Metabolic Engineering

2026

Machine learning reveals proteome-encoded growth determinants underlying metabolic versatility of Rhodopseudomonas palustris on lignin-derived aromatics.

Abraham Osinuga, Mark Kathol, and Rajib Saha. mSystems 11(6): e00383-26.

"Separating shared growth-associated proteins from environment-specific adaptation in R. palustris."

Machine Learning Systems Biology

2026

Multi-omics integration in genome-scale metabolic models: a review of constraint-based approaches.

Nabia Shahreen and Abraham Osinuga et al. · First-author: Abraham Osinuga. Molecular Omics 22(2): aaiag005.

Nabia Shahreen and Abraham Osinuga contributed equally.

"How molecular measurements become modeling constraints, rather than simply more input features."

Systems Biology Metabolic Engineering

2026

In-silico discovery of Dipeptidyl Peptidase-4 inhibitors from African medicinal plants: Molecular docking, ADMET, dynamics simulation, and MM-GBSA analyses.

Ishola Abeeb Akinwumi et al. · Co-author: Abraham Osinuga. The Nucleus 69(1): 75–97.

Published online in January 2025; 2026 journal issue.

"Molecular docking, ADMET, dynamics simulation for drug discovery from natural products."

Molecular Simulation Biomedical

2025 · Preprint, version 2

Robust Prediction of Enzyme Variant Kinetics with RealKcat.

Karuna Anna Sajeevan and Abraham Osinuga et al. · First-author: Abraham Osinuga. bioRxiv.

Earlier preprint in the CatRange research lineage. The peer-reviewed article is listed above.

Enzyme Engineering Machine Learning Metabolic Engineering

2025

Biochemical mechanisms and molecular interactions of vitamins in cancer therapy.

Abdullahi T. Aborode et al. · Co-author: Abraham Osinuga. Cancer Pathogenesis and Therapy 3(1): 3–15.

"Review connecting vitamin biochemistry to cancer therapeutic mechanisms."

Biomedical

2025

The role of machine learning in discovering biomarkers and predicting treatment strategies for neurodegenerative diseases: A narrative review.

Abdullahi Tunde Aborode et al. · Co-author: Abraham Osinuga. NeuroMarkers 2(1): 100034.

"Narrative review of ML applications in neurodegenerative disease biomarker discovery."

Machine Learning Biomedical

2024

Deciphering sphingolipid biosynthesis dynamics in Arabidopsis thaliana cell cultures: Quantitative analysis amid data variability.

Abraham Osinuga et al. iScience 27(9): 110675.

"Isotope-informed dynamic modeling of plant sphingolipid metabolism with explicit uncertainty treatment."

Systems Biology Metabolic Engineering

2024

Identification of novel phytotherapeutic agents for understanding hypertrophic cardiomyopathy via genetic mapping and advanced computational analysis.

Abdullahi Tunde Aborode et al. · Co-author: Abraham Osinuga. Genome Instability & Disease 5(6): 262–286.

"Genetic mapping and computational analysis for cardiomyopathy drug discovery."

Biomedical Molecular Simulation

2024

Hyperparameter Tuning in Machine Learning: A Comprehensive Review.

Justus A Ilemobayo et al. · Co-author: Abraham Osinuga. Journal of Engineering Research and Reports 26(6): 388–395.

"Comprehensive review of hyperparameter optimization strategies across ML architectures."

Machine Learning

2024

Transforming early microbial detection: Investigating innovative biosensors for emerging infectious diseases.

Godfred Yawson Scott et al. · Co-author: Abraham Osinuga. Advances in Biomarker Sciences and Technology 6: 59–71.

"Innovative biosensors for early detection of emerging infectious diseases."

Biomedical

2024

Nanomedicine in cancer therapy: Advancing precision treatments.

Abdullahi Tunde Aborode et al. · Co-author: Abraham Osinuga. Advances in Biomarker Sciences and Technology 6: 105–119.

"Review of nanomedicine approaches advancing precision cancer therapy."

Biomedical

M.S. Thesis (2024)

Dynamic Metabolic Flux Analysis Amidst Data Variability: Sphingolipid Biosynthesis Case Study in Arabidopsis thaliana Cell Cultures.

Abraham Boluwatife Osinuga. University of Nebraska–Lincoln, M.S. thesis.

Systems Biology Metabolic Engineering

2023

Offset-Free Quasi-Infinite Horizon Nonlinear Model Predictive Controller Design Using Parameter Adaptation.

Ayorinde Bamimore et al. · Co-author: Abraham Osinuga. Journal of Dynamic Systems, Measurement, and Control 145(10): 101005.

"Parameter-adaptive nonlinear model predictive control ensuring offset-free tracking."

Process Control

2022

An online machine learning-based sensors clustering system for efficient and cost-effective environmental monitoring in controlled environment agriculture.

Daniel Dooyum Uyeh et al. · Co-author: Abraham Osinuga. Computers and Electronics in Agriculture 199: 107139.

"Internet-of-Things (IoT) sensor placement optimization for controlled-environment agriculture."

Smart Agriculture Machine Learning

2021

Design, fabrication and interfacing of a cascaded three-tank system with micro-controller board for research and education in process control.

A. Bamimore et al. · Co-author: Abraham Osinuga. Innovative Solutions in Engineering: Journal of the Nigerian Academy of Engineering 3(1).

"Physical process platform design for research and education in process control."

Process Control

2021

A Comparison of Two Artificial Neural Networks for Modelling and Predictive Control of a Cascaded Three-Tank System.

A. Bamimore et al. · Co-author: Abraham Osinuga. IFAC-PapersOnLine 54(21): 145–150.

"Neural network architectures compared for multivariable predictive control."

Process Control Machine Learning

Conference presentations & abstracts

Recent talks and posters, with conference records and source links on the presentations page.

NOBCChE 2026 · Cincinnati, Ohio

An Agentic Framework for Enzyme Kinetics Prediction and Interpretation

Presenter: Abraham Osinuga · September 23, 2026 · Biochemistry III

Podium presenter, poster judge, and Advancing Science Conference Grant recipient (Tier 1).

Speaker programme
  • 2026 · Oral presentation

    Revealing Core Growth Determinants Hidden in a Redundant Proteome: Solving a High-Complexity Biological Problem

    Presenter: Abraham Osinuga

    College of Engineering Graduate Student Symposium, University of Nebraska–Lincoln · Willa Cather Dining Complex, Red Cloud B, Lincoln, Nebraska, USA

    Programme
  • 2025 · Poster presentation

    Empirical and Computational Advances in Enzyme Kinetics Prediction: A Machine Learning Approach to Catalytic Variability

    Presenter: Abraham Osinuga

    Metabolic Engineering 16 (ME16), International Metabolic Engineering Society · Copenhagen, Denmark

    Programme
  • 2024 · Poster abstract

    Embracing Variability in Dynamic Metabolic Modeling: Novel Insights into Arabidopsis thaliana’s Sphingolipid Biosynthesis

    Abraham B. Osinuga et al.

    26th International Symposium on Plant Lipids · Lincoln, Nebraska, USA

    Poster abstract
All talks, abstracts & features